IL_7MQ8_071

3D structure

PDB id

7MQ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human SSU processome, state pre-A1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CACUG*CGUAG

Length

10 nucleotides

Bulged bases

7MQ8|1|L1|U|1535

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MQ8|1|L1|C|1532
7MQ8|1|L1|A|1533
7MQ8|1|L1|C|1534
7MQ8|1|L1|U|1535
7MQ8|1|L1|G|1536
*
7MQ8|1|L1|C|1597
7MQ8|1|L1|G|1598
7MQ8|1|L1|U|1599
7MQ8|1|L1|A|1637
7MQ8|1|L1|G|1638

Current chains

Chain L1

18S rRNA

Nearby chains

Chain L3

40S ribosomal protein S18

Chain L5

40S ribosomal protein S5

Chain LJ

U3 small nucleolar RNA-associated protein 15 homolog

Chain SK

Ribosomal RNA small subunit methyltransferase NEP1