IL_7MQ8_094

3D structure

PDB id

7MQ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human SSU processome, state pre-A1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAGGAA*UGAG

Length

11 nucleotides

Bulged bases

7MQ8|1|L2|G|82

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MQ8|1|L2|C|79
7MQ8|1|L2|G|80
7MQ8|1|L2|A|81
7MQ8|1|L2|G|82
7MQ8|1|L2|G|83
7MQ8|1|L2|A|84
7MQ8|1|L2|A|85
*
7MQ8|1|L2|U|210
7MQ8|1|L2|G|211
7MQ8|1|L2|A|212
7MQ8|1|L2|G|213

Current chains

Chain L2

U3 snoRNA

Nearby chains

Chain LS

U3 small nucleolar RNA-associated protein 18 homolog

Chain SB

Nucleolar protein 58

Chain SE

NHP2-like protein 1

Chain SY

Probable U3 small nucleolar RNA-associated protein 11