IL_7MQ9_025
3D structure
- PDB id
- 7MQ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human SSU processome, state pre-A1*
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.87 Å
Loop
- Sequence
- CAGAUCA*UUGGCUAG
- Length
- 15 nucleotides
- Bulged bases
- 7MQ9|1|L1|U|227
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7MQ9|1|L1|C|223
7MQ9|1|L1|A|224
7MQ9|1|L1|G|225
7MQ9|1|L1|A|226
7MQ9|1|L1|U|227
7MQ9|1|L1|C|228
7MQ9|1|L1|A|229
*
7MQ9|1|L1|U|286
7MQ9|1|L1|U|287
7MQ9|1|L1|G|288
7MQ9|1|L1|G|289
7MQ9|1|L1|C|295
7MQ9|1|L1|U|296
7MQ9|1|L1|A|297
7MQ9|1|L1|G|298
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain L4
- 40S ribosomal protein S4 X isoform
- Chain L6
- 40S ribosomal protein S6
- Chain L8
- 40S ribosomal protein S8
- Chain LD
- 40S ribosomal protein S11
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