IL_7MQ9_090

3D structure

PDB id

7MQ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human SSU processome, state pre-A1*

Experimental method

ELECTRON MICROSCOPY

Resolution

3.87 Å

Loop

Sequence

CGCAC*GGCG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MQ9|1|L1|C|315
7MQ9|1|L1|G|316
7MQ9|1|L1|C|317
7MQ9|1|L1|A|318
7MQ9|1|L1|C|319
*
7MQ9|1|L1|G|332
7MQ9|1|L1|G|333
7MQ9|1|L1|C|334
7MQ9|1|L1|G|335

Current chains

Chain L1

18S rRNA

Nearby chains

Chain L4

40S ribosomal protein S4 X isoform

Chain L6

40S ribosomal protein S6

Chain SP

Small subunit processome component 20 homolog