IL_7MQ9_101
3D structure
- PDB id
- 7MQ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human SSU processome, state pre-A1*
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.87 Å
Loop
- Sequence
- GAGAGGUAGC*GCGGUC
- Length
- 16 nucleotides
- Bulged bases
- 7MQ9|1|L2|G|88, 7MQ9|1|L2|U|92, 7MQ9|1|L2|U|208
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7MQ9|1|L2|G|86
7MQ9|1|L2|A|87
7MQ9|1|L2|G|88
7MQ9|1|L2|A|89
7MQ9|1|L2|G|90
7MQ9|1|L2|G|91
7MQ9|1|L2|U|92
7MQ9|1|L2|A|93
7MQ9|1|L2|G|94
7MQ9|1|L2|C|95
*
7MQ9|1|L2|G|204
7MQ9|1|L2|C|205
7MQ9|1|L2|G|206
7MQ9|1|L2|G|207
7MQ9|1|L2|U|208
7MQ9|1|L2|C|209
Current chains
- Chain L2
- U3 snoRNA
Nearby chains
- Chain SB
- Nucleolar protein 58
- Chain SC
- rRNA 2'-O-methyltransferase fibrillarin
- Chain SE
- NHP2-like protein 1
- Chain SI
- Ribosome biogenesis protein BMS1 homolog
- Chain SQ
- Deoxynucleotidyltransferase terminal-interacting protein 2
- Chain SY
- Probable U3 small nucleolar RNA-associated protein 11
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