IL_7MQA_026
3D structure
- PDB id
- 7MQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human SSU processome, state post-A1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGG*CGAU(OMU)C
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MQA_026 not in the Motif Atlas
- Homologous match to IL_4V88_404
- Geometric discrepancy: 0.1149
- The information below is about IL_4V88_404
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_11347.3
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7MQA|1|L1|G|411
7MQA|1|L1|G|412
7MQA|1|L1|G|413
*
7MQA|1|L1|C|424
7MQA|1|L1|G|425
7MQA|1|L1|A|426
7MQA|1|L1|U|427
7MQA|1|L1|OMU|428
7MQA|1|L1|C|429
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain L4
- 40S ribosomal protein S4, X isoform
- Chain L9
- 40S ribosomal protein S9
- Chain SI
- Ribosome biogenesis protein BMS1 homolog
- Chain SR
- 40S ribosomal protein S23
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