IL_7MSC_046

3D structure

PDB id

7MSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

CAGCGAAG*UGGAG

Length

13 nucleotides

Bulged bases

7MSC|1|A|C|1342

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSC_046 not in the Motif Atlas

Homologous match to IL_7RQB_047

Geometric discrepancy: 0.1588

The information below is about IL_7RQB_047

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.2

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

28

Unit IDs

7MSC|1|A|C|1339
7MSC|1|A|A|1340
7MSC|1|A|G|1341
7MSC|1|A|C|1342
7MSC|1|A|G|1343
7MSC|1|A|A|1344
7MSC|1|A|A|1345
7MSC|1|A|G|1346
*
7MSC|1|A|U|1365
7MSC|1|A|G|1366
7MSC|1|A|G|1367
7MSC|1|A|A|1368
7MSC|1|A|G|1369

Current chains

Chain A

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L20