IL_7MSC_058

3D structure

PDB id

7MSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

GGAA*UCUGC

Length

9 nucleotides

Bulged bases

7MSC|1|A|U|1796

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSC_058 not in the Motif Atlas

Homologous match to IL_5J7L_296

Geometric discrepancy: 0.2133

The information below is about IL_5J7L_296

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_58112.2

Basepair signature

cWW-cWW-L-R-cWW

Number of instances in this motif group

4

Unit IDs

7MSC|1|A|G|1670
7MSC|1|A|G|1671
7MSC|1|A|A|1672
7MSC|1|A|A|1673
*
7MSC|1|A|U|1794
7MSC|1|A|C|1795
7MSC|1|A|U|1796
7MSC|1|A|G|1797
7MSC|1|A|C|1798

Current chains

Chain A

23S rRNA

Nearby chains