IL_7MSC_069

3D structure

PDB id

7MSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

AAUAUC*GGAU

Length

10 nucleotides

Bulged bases

7MSC|1|A|U|1949, 7MSC|1|A|A|1950

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSC_069 not in the Motif Atlas

Geometric match to IL_6DLR_005

Geometric discrepancy: 0.2773

The information below is about IL_6DLR_005

Detailed Annotation

tWW and near cWH

Broad Annotation

tWW and near cWH

Motif group

IL_40706.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

7MSC|1|A|A|1947
7MSC|1|A|A|1948
7MSC|1|A|U|1949
7MSC|1|A|A|1950
7MSC|1|A|U|1951
7MSC|1|A|C|1952
*
7MSC|1|A|G|1977
7MSC|1|A|G|1978
7MSC|1|A|A|1979
7MSC|1|A|U|1980

Current chains

Chain A

23S rRNA

Nearby chains