IL_7MSH_044

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CAGCGAAG*UGGAG

Length

13 nucleotides

Bulged bases

7MSH|1|A|C|1342

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSH_044 not in the Motif Atlas

Homologous match to IL_7A0S_043

Geometric discrepancy: 0.1794

The information below is about IL_7A0S_043

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_90775.2

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

30

Unit IDs

7MSH|1|A|C|1339
7MSH|1|A|A|1340
7MSH|1|A|G|1341
7MSH|1|A|C|1342
7MSH|1|A|G|1343
7MSH|1|A|A|1344
7MSH|1|A|A|1345
7MSH|1|A|G|1346
*
7MSH|1|A|U|1365
7MSH|1|A|G|1366
7MSH|1|A|G|1367
7MSH|1|A|A|1368
7MSH|1|A|G|1369

Current chains

Chain A

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L20