IL_7MSH_119

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GGAUAAG*UCUAAUAC

Length

15 nucleotides

Bulged bases

7MSH|1|a|U|169

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSH_119 not in the Motif Atlas

Homologous match to IL_5J7L_012

Geometric discrepancy: 0.1665

The information below is about IL_5J7L_012

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

7MSH|1|a|G|143
7MSH|1|a|G|144
7MSH|1|a|A|145
7MSH|1|a|U|146
7MSH|1|a|A|147
7MSH|1|a|A|148
7MSH|1|a|G|149
*
7MSH|1|a|U|164
7MSH|1|a|C|165
7MSH|1|a|U|166
7MSH|1|a|A|167
7MSH|1|a|A|168
7MSH|1|a|U|169
7MSH|1|a|A|170
7MSH|1|a|C|171

Current chains

Chain a

16S rRNA

Nearby chains

Chain t

30S ribosomal protein S20