IL_7MSH_179
3D structure
- PDB id
- 7MSH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mtb 70SIC in complex with MtbEttA at Pre_R1 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- GGGGAG*CGUGGAUCC
- Length
- 15 nucleotides
- Bulged bases
- 7MSH|1|A|G|101
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MSH_179 not in the Motif Atlas
- Geometric match to IL_4LFB_031
- Geometric discrepancy: 0.2349
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
7MSH|1|A|G|80
7MSH|1|A|G|81
7MSH|1|A|G|82
7MSH|1|A|G|83
7MSH|1|A|A|84
7MSH|1|A|G|85
*
7MSH|1|A|C|98
7MSH|1|A|G|99
7MSH|1|A|U|100
7MSH|1|A|G|101
7MSH|1|A|G|102
7MSH|1|A|A|103
7MSH|1|A|U|104
7MSH|1|A|C|105
7MSH|1|A|C|106
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain U
- 50S ribosomal protein L24
- Chain Y
- 50S ribosomal protein L29
Coloring options: