IL_7MSH_186

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GAUGGC*GUCAGC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSH_186 not in the Motif Atlas

Geometric match to IL_6CZR_369

Geometric discrepancy: 0.3822

The information below is about IL_6CZR_369

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_71294.1

Basepair signature

cWW-cWW-L-R-L-R-cWW-cWW

Number of instances in this motif group

3

Unit IDs

7MSH|1|A|G|1000
7MSH|1|A|A|1001
7MSH|1|A|U|1002
7MSH|1|A|G|1003
7MSH|1|A|G|1004
7MSH|1|A|C|1005
*
7MSH|1|A|G|1031
7MSH|1|A|U|1032
7MSH|1|A|C|1033
7MSH|1|A|A|1034
7MSH|1|A|G|1035
7MSH|1|A|C|1036

Current chains

Chain A

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L16

Chain V

50S ribosomal protein L25