IL_7MSM_014

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

GUG*CU

Length

5 nucleotides

Bulged bases

7MSM|1|A|U|384

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSM_014 not in the Motif Atlas

Geometric match to IL_3TZR_002

Geometric discrepancy: 0.2991

The information below is about IL_3TZR_002

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

7MSM|1|A|G|383
7MSM|1|A|U|384
7MSM|1|A|G|385
*
7MSM|1|A|C|398
7MSM|1|A|U|399

Current chains

Chain A

23S rRNA

Nearby chains

Chain U

50S ribosomal protein L24