IL_7MSM_081

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

UUAA*UGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSM_081 not in the Motif Atlas

Homologous match to IL_5J7L_317

Geometric discrepancy: 0.0978

The information below is about IL_5J7L_317

Detailed Annotation

UAA/GAN variation

Broad Annotation

No text annotation

Motif group

IL_77691.5

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

7MSM|1|A|U|2098
7MSM|1|A|U|2099
7MSM|1|A|A|2100
7MSM|1|A|A|2101
*
7MSM|1|A|U|2112
7MSM|1|A|G|2113
7MSM|1|A|A|2114
7MSM|1|A|A|2115
7MSM|1|A|G|2116

Current chains

Chain A

23S rRNA

Nearby chains

Chain 8

50S ribosomal protein L1