IL_7MSM_099

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

CUU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSM_099 not in the Motif Atlas

Geometric match to IL_5TBW_016

Geometric discrepancy: 0.145

The information below is about IL_5TBW_016

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

7MSM|1|A|C|2699
7MSM|1|A|U|2700
7MSM|1|A|U|2701
*
7MSM|1|A|A|2725
7MSM|1|A|U|2726
7MSM|1|A|G|2727

Current chains

Chain A

23S rRNA

Nearby chains

Chain 7

50S ribosomal protein L37

Chain M

50S ribosomal protein L16