IL_7MSM_112

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

GG*UGC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSM_112 not in the Motif Atlas

Homologous match to IL_7A0S_099

Geometric discrepancy: 0.2327

The information below is about IL_7A0S_099

Detailed Annotation

Major groove intercalation

Broad Annotation

Major groove intercalation

Motif group

IL_00225.14

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

7MSM|1|A|G|3073
7MSM|1|A|G|3074
*
7MSM|1|A|U|3113
7MSM|1|A|G|3114
7MSM|1|A|C|3115

Current chains

Chain A

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L17