IL_7MSM_136

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

ACAAU*AU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSM_136 not in the Motif Atlas

Geometric match to IL_4LFB_015

Geometric discrepancy: 0.1262

The information below is about IL_4LFB_015

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_03109.3

Basepair signature

cWW-cWS-tWH-cWW-L

Number of instances in this motif group

6

Unit IDs

7MSM|1|a|A|370
7MSM|1|a|C|371
7MSM|1|a|A|372
7MSM|1|a|A|373
7MSM|1|a|U|374
*
7MSM|1|a|A|388
7MSM|1|a|U|389

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16