IL_7MSM_158

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

GAC*GUAC

Length

7 nucleotides

Bulged bases

7MSM|1|a|A|1387

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSM_158 not in the Motif Atlas

Geometric match to IL_4V9F_097

Geometric discrepancy: 0.2602

The information below is about IL_4V9F_097

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_07785.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

7MSM|1|a|G|915
7MSM|1|a|A|916
7MSM|1|a|C|917
*
7MSM|1|a|G|1385
7MSM|1|a|U|1386
7MSM|1|a|A|1387
7MSM|1|a|C|1388

Current chains

Chain a

16S rRNA

Nearby chains

Chain e

30S ribosomal protein S5