IL_7MSZ_022

3D structure

PDB id

7MSZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAGC*GUGAUAGC

Length

13 nucleotides

Bulged bases

7MSZ|1|A|G|930, 7MSZ|1|A|G|934

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSZ_022 not in the Motif Atlas

Homologous match to IL_5J7L_260

Geometric discrepancy: 0.161

The information below is about IL_5J7L_260

Detailed Annotation

tHW-tHW cross-strand stack

Broad Annotation

No text annotation

Motif group

IL_54041.2

Basepair signature

cWW-L-R-L-R-tWH-L-cWW

Number of instances in this motif group

7

Unit IDs

7MSZ|1|A|G|803
7MSZ|1|A|A|804
7MSZ|1|A|A|805
7MSZ|1|A|G|806
7MSZ|1|A|C|807
*
7MSZ|1|A|G|928
7MSZ|1|A|U|929
7MSZ|1|A|G|930
7MSZ|1|A|A|931
7MSZ|1|A|U|932
7MSZ|1|A|A|933
7MSZ|1|A|G|934
7MSZ|1|A|C|935

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain L

50S ribosomal protein L15