IL_7MSZ_175

3D structure

PDB id

7MSZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUGGC*GAGC

Length

9 nucleotides

Bulged bases

7MSZ|1|a|G|1435

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSZ_175 not in the Motif Atlas

Geometric match to IL_3NPQ_006

Geometric discrepancy: 0.2222

The information below is about IL_3NPQ_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65740.2

Basepair signature

cWW-L-R-L-R-cWW

Number of instances in this motif group

4

Unit IDs

7MSZ|1|a|G|1432
7MSZ|1|a|U|1433
7MSZ|1|a|G|1434
7MSZ|1|a|G|1435
7MSZ|1|a|C|1436
*
7MSZ|1|a|G|1452
7MSZ|1|a|A|1453
7MSZ|1|a|G|1454
7MSZ|1|a|C|1455

Current chains

Chain a

16S rRNA

Nearby chains

Chain P

50S ribosomal protein L19

Chain t

30S ribosomal protein S20