IL_7MSZ_182

3D structure

PDB id

7MSZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCUACUG*CAAAC

Length

12 nucleotides

Bulged bases

7MSZ|1|A|U|995

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSZ_182 not in the Motif Atlas

Geometric match to IL_4V9F_035

Geometric discrepancy: 0.2119

The information below is about IL_4V9F_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38603.1

Basepair signature

cWW-cWS-L-R-L-R-R-L-cWW

Number of instances in this motif group

2

Unit IDs

7MSZ|1|A|G|993
7MSZ|1|A|C|994
7MSZ|1|A|U|995
7MSZ|1|A|A|996
7MSZ|1|A|C|997
7MSZ|1|A|U|998
7MSZ|1|A|G|999
*
7MSZ|1|A|C|1037
7MSZ|1|A|A|1038
7MSZ|1|A|A|1039
7MSZ|1|A|A|1040
7MSZ|1|A|C|1041

Current chains

Chain A

23S rRNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain M

50S ribosomal protein L16