IL_7MSZ_188

3D structure

PDB id

7MSZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAACUCGG*CUGUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSZ_188 not in the Motif Atlas

Homologous match to IL_4WF9_117

Geometric discrepancy: 0.1004

The information below is about IL_4WF9_117

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_80252.2

Basepair signature

cWW-tSH-cWW-tHW-R-L-cWW-L-L-R

Number of instances in this motif group

11

Unit IDs

7MSZ|1|A|G|1901
7MSZ|1|A|G|1902
7MSZ|1|A|A|1903
7MSZ|1|A|A|1904
7MSZ|1|A|C|1905
7MSZ|1|A|U|1906
7MSZ|1|A|C|1907
7MSZ|1|A|G|1908
7MSZ|1|A|G|1909
*
7MSZ|1|A|C|2228
7MSZ|1|A|U|2229
7MSZ|1|A|G|2230
7MSZ|1|A|U|2231
7MSZ|1|A|C|2232

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain K

50S ribosomal protein L14