IL_7MSZ_194

3D structure

PDB id

7MSZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAUGACG*UGUAAAC

Length

15 nucleotides

Bulged bases

7MSZ|1|a|U|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSZ_194 not in the Motif Atlas

Homologous match to IL_6CZR_359

Geometric discrepancy: 0.1813

The information below is about IL_6CZR_359

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28026.2

Basepair signature

cWW-tSH-tWH-cWH-tSS-tHW-tHH-cWW

Number of instances in this motif group

3

Unit IDs

7MSZ|1|a|G|408
7MSZ|1|a|G|409
7MSZ|1|a|A|410
7MSZ|1|a|U|411
7MSZ|1|a|G|412
7MSZ|1|a|A|413
7MSZ|1|a|C|414
7MSZ|1|a|G|415
*
7MSZ|1|a|U|426
7MSZ|1|a|G|427
7MSZ|1|a|U|428
7MSZ|1|a|A|429
7MSZ|1|a|A|430
7MSZ|1|a|A|431
7MSZ|1|a|C|432

Current chains

Chain a

16S rRNA

Nearby chains

Chain d

30S ribosomal protein S4