IL_7MT2_174

3D structure

PDB id

7MT2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

CGGAUC*GUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MT2_174 not in the Motif Atlas

Geometric match to IL_4LFB_055

Geometric discrepancy: 0.0846

The information below is about IL_4LFB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_57885.2

Basepair signature

cWW-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

7MT2|1|a|C|1295
7MT2|1|a|G|1296
7MT2|1|a|G|1297
7MT2|1|a|A|1298
7MT2|1|a|U|1299
7MT2|1|a|C|1300
*
7MT2|1|a|G|1321
7MT2|1|a|U|1322
7MT2|1|a|G|1323
7MT2|1|a|A|1324
7MT2|1|a|A|1325
7MT2|1|a|G|1326

Current chains

Chain a

16S rRNA

Nearby chains

Chain m

30S ribosomal protein S13