3D structure

PDB id
7MT3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70S with P/E tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.8 Å

Loop

Sequence
GUUGC*GGACUC
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7MT3_163 not in the Motif Atlas
Homologous match to IL_5J7L_051
Geometric discrepancy: 0.2726
The information below is about IL_5J7L_051
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_06691.1
Basepair signature
cWW-cWS-L-R-L-R-cWW-L
Number of instances in this motif group
2

Unit IDs

7MT3|1|a|G|1115
7MT3|1|a|U|1116
7MT3|1|a|U|1117
7MT3|1|a|G|1118
7MT3|1|a|C|1119
*
7MT3|1|a|G|1136
7MT3|1|a|G|1137
7MT3|1|a|A|1138
7MT3|1|a|C|1139
7MT3|1|a|U|1140
7MT3|1|a|C|1141

Current chains

Chain a
16S rRNA

Nearby chains

Chain i
30S ribosomal protein S9
Chain j
30S ribosomal protein S10

Coloring options:


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