IL_7MT3_188

3D structure

PDB id

7MT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S with P/E tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UGG*CCA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MT3_188 not in the Motif Atlas

Geometric match to IL_4WF9_121

Geometric discrepancy: 0.184

The information below is about IL_4WF9_121

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.1

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

39

Unit IDs

7MT3|1|A|U|2146
7MT3|1|A|G|2147
7MT3|1|A|G|2148
*
7MT3|1|A|C|2158
7MT3|1|A|C|2159
7MT3|1|A|A|2160

Current chains

Chain A

23S rRNA

Nearby chains

Chain a

Small subunit ribosomal RNA; SSU rRNA

Chain y

Transfer RNA; tRNA