IL_7MT7_023

3D structure

PDB id

7MT7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S with P and E site tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.71 Å

Loop

Sequence

GAAGC*GUGAUAGC

Length

13 nucleotides

Bulged bases

7MT7|1|A|G|930, 7MT7|1|A|G|934

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MT7_023 not in the Motif Atlas

Geometric match to IL_7RQB_018

Geometric discrepancy: 0.1416

The information below is about IL_7RQB_018

Detailed Annotation

tHW-tHW cross-strand stack

Broad Annotation

No text annotation

Motif group

IL_17470.6

Basepair signature

cWW-tWW-L-R-tWH-L-cWW

Number of instances in this motif group

7

Unit IDs

7MT7|1|A|G|803
7MT7|1|A|A|804
7MT7|1|A|A|805
7MT7|1|A|G|806
7MT7|1|A|C|807
*
7MT7|1|A|G|928
7MT7|1|A|U|929
7MT7|1|A|G|930
7MT7|1|A|A|931
7MT7|1|A|U|932
7MT7|1|A|A|933
7MT7|1|A|G|934
7MT7|1|A|C|935

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain L

50S ribosomal protein L15