IL_7N1P_023

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GAAGGG*CAUUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N1P_023 not in the Motif Atlas

Homologous match to IL_5J7L_023

Geometric discrepancy: 0.0687

The information below is about IL_5J7L_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70801.1

Basepair signature

cWW-cWW-L-R-tWW-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

7N1P|1|16|G|450
7N1P|1|16|A|451
7N1P|1|16|A|452
7N1P|1|16|G|453
7N1P|1|16|G|454
7N1P|1|16|G|455
*
7N1P|1|16|C|477
7N1P|1|16|A|478
7N1P|1|16|U|479
7N1P|1|16|U|480
7N1P|1|16|G|481
7N1P|1|16|A|482
7N1P|1|16|C|483

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SP

30S ribosomal protein S16