IL_7N1P_034

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

UAGAG*UGGA

Length

9 nucleotides

Bulged bases

7N1P|1|16|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N1P_034 not in the Motif Atlas

Homologous match to IL_5J7L_033

Geometric discrepancy: 0.057

The information below is about IL_5J7L_033

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

7N1P|1|16|U|662
7N1P|1|16|A|663
7N1P|1|16|G|664
7N1P|1|16|A|665
7N1P|1|16|G|666
*
7N1P|1|16|U|740
7N1P|1|16|G|741
7N1P|1|16|G|742
7N1P|1|16|A|743

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SF

30S ribosomal protein S6

Chain SO

30S ribosomal protein S15

Chain SR

30S ribosomal protein S18