3D structure

PDB id
7N1P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.33 Å

Loop

Sequence
UACAAAG*CAUAAAG
Length
14 nucleotides
Bulged bases
7N1P|1|16|U|1286
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7N1P_055 not in the Motif Atlas
Homologous match to IL_5J7L_054
Geometric discrepancy: 0.0924
The information below is about IL_5J7L_054
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_09129.2
Basepair signature
cWW-L-R-tWH-L-R-L-tWW-cWW
Number of instances in this motif group
2

Unit IDs

7N1P|1|16|U|1247
7N1P|1|16|A|1248
7N1P|1|16|C|1249
7N1P|1|16|A|1250
7N1P|1|16|A|1251
7N1P|1|16|A|1252
7N1P|1|16|G|1253
*
7N1P|1|16|C|1284
7N1P|1|16|A|1285
7N1P|1|16|U|1286
7N1P|1|16|A|1287
7N1P|1|16|A|1288
7N1P|1|16|A|1289
7N1P|1|16|G|1290

Current chains

Chain 16
16S rRNA

Nearby chains

Chain SG
30S ribosomal protein S7
Chain SI
30S ribosomal protein S9
Chain SJ
30S ribosomal protein S10
Chain SN
30S ribosomal protein S14

Coloring options:


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