IL_7N1P_087

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GGG*CAAUC

Length

8 nucleotides

Bulged bases

7N1P|1|23|G|776, 7N1P|1|23|A|788, 7N1P|1|23|A|789

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N1P_087 not in the Motif Atlas

Geometric match to IL_5J7L_265

Geometric discrepancy: 0.0964

The information below is about IL_5J7L_265

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_06549.2

Basepair signature

cWW-cWW

Number of instances in this motif group

6

Unit IDs

7N1P|1|23|G|775
7N1P|1|23|G|776
7N1P|1|23|G|777
*
7N1P|1|23|C|787
7N1P|1|23|A|788
7N1P|1|23|A|789
7N1P|1|23|U|790
7N1P|1|23|C|791

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LB

50S ribosomal protein L2

Chain LV

50S ribosomal protein L22

Chain Lh

50S ribosomal protein L34