IL_7N1P_104

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GAAG*CGGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N1P_104 not in the Motif Atlas

Homologous match to IL_5J7L_283

Geometric discrepancy: 0.1145

The information below is about IL_5J7L_283

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

7N1P|1|23|G|1038
7N1P|1|23|A|1039
7N1P|1|23|A|1040
7N1P|1|23|G|1041
*
7N1P|1|23|C|1114
7N1P|1|23|G|1115
7N1P|1|23|G|1116
7N1P|1|23|C|1117

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LF

50S ribosomal protein L6

Chain LP

50S ribosomal protein L16

Chain LY

50S ribosomal protein L25

Chain Lj

50S ribosomal protein L36