IL_7N1P_110

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CUGCGAAG*UGGAG

Length

13 nucleotides

Bulged bases

7N1P|1|23|C|1211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N1P_110 not in the Motif Atlas

Homologous match to IL_5J7L_288

Geometric discrepancy: 0.0626

The information below is about IL_5J7L_288

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.9

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

27

Unit IDs

7N1P|1|23|C|1208
7N1P|1|23|U|1209
7N1P|1|23|G|1210
7N1P|1|23|C|1211
7N1P|1|23|G|1212
7N1P|1|23|A|1213
7N1P|1|23|A|1214
7N1P|1|23|G|1215
*
7N1P|1|23|U|1234
7N1P|1|23|G|1235
7N1P|1|23|G|1236
7N1P|1|23|A|1237
7N1P|1|23|G|1238

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LT

50S ribosomal protein L20