IL_7N1P_161

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

CCAAG*CGACG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N1P_161 not in the Motif Atlas

Homologous match to IL_7A0S_087

Geometric discrepancy: 0.1411

The information below is about IL_7A0S_087

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_17948.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7N1P|1|23|C|2466
7N1P|1|23|C|2467
7N1P|1|23|A|2468
7N1P|1|23|A|2469
7N1P|1|23|G|2470
*
7N1P|1|23|C|2480
7N1P|1|23|G|2481
7N1P|1|23|A|2482
7N1P|1|23|C|2483
7N1P|1|23|G|2484

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LP

50S ribosomal protein L16

Chain Lj

50S ribosomal protein L36

Chain Pt

Transfer RNA; tRNA