IL_7N1P_166

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GAAC*G(PSU)(PSU)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N1P_166 not in the Motif Atlas

Geometric match to IL_6AZ4_001

Geometric discrepancy: 0.3399

The information below is about IL_6AZ4_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69145.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

5

Unit IDs

7N1P|1|23|G|2588
7N1P|1|23|A|2589
7N1P|1|23|A|2590
7N1P|1|23|C|2591
*
7N1P|1|23|G|2603
7N1P|1|23|PSU|2604
7N1P|1|23|PSU|2605
7N1P|1|23|C|2606

Current chains

Chain 23

23S rRNA

Nearby chains

Chain Dt

Transfer RNA; tRNA

Chain LB

50S ribosomal protein L2