IL_7N1P_189

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N1P_189 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.0558

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7N1P|1|23|U|1851
7N1P|1|23|U|1852
7N1P|1|23|A|1853
7N1P|1|23|A|1854
7N1P|1|23|U|1855
7N1P|1|23|U|1856
7N1P|1|23|G|1857
7N1P|1|23|A|1858
7N1P|1|23|U|1859
7N1P|1|23|G|1860
*
7N1P|1|23|U|1882
7N1P|1|23|U|1883
7N1P|1|23|G|1884
7N1P|1|23|A|1885
7N1P|1|23|U|1886
7N1P|1|23|C|1887
7N1P|1|23|G|1888
7N1P|1|23|A|1889
7N1P|1|23|A|1890
7N1P|1|23|G|1891

Current chains

Chain 23

23S rRNA

Nearby chains