IL_7N2C_062

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

UAG*CG

Length

5 nucleotides

Bulged bases

7N2C|1|16|A|1441

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2C_062 not in the Motif Atlas

Geometric match to IL_7RQB_062

Geometric discrepancy: 0.2267

The information below is about IL_7RQB_062

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_37497.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

118

Unit IDs

7N2C|1|16|U|1440
7N2C|1|16|A|1441
7N2C|1|16|G|1442
*
7N2C|1|16|C|1460
7N2C|1|16|G|1461

Current chains

Chain 16

16S rRNA

Nearby chains

Chain 23

Large subunit ribosomal RNA; LSU rRNA

Chain LS

50S ribosomal protein L19

Chain ST

30S ribosomal protein S20