IL_7N2C_072

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2C_072 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2775

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7N2C|1|23|C|274
7N2C|1|23|C|275
7N2C|1|23|U|276
7N2C|1|23|G|277
7N2C|1|23|A|278
7N2C|1|23|A|279
7N2C|1|23|U|280
7N2C|1|23|C|281
*
7N2C|1|23|G|359
7N2C|1|23|U|360
7N2C|1|23|G|361
7N2C|1|23|A|362
7N2C|1|23|G|363

Current chains

Chain 23

23S rRNA

Nearby chains