IL_7N2C_080

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

GC*GAC

Length

5 nucleotides

Bulged bases

7N2C|1|23|A|764

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2C_080 not in the Motif Atlas

Geometric match to IL_4V9F_025

Geometric discrepancy: 0.0795

The information below is about IL_4V9F_025

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

7N2C|1|23|G|697
7N2C|1|23|C|698
*
7N2C|1|23|G|763
7N2C|1|23|A|764
7N2C|1|23|C|765

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LB

50S ribosomal protein L2