IL_7N2C_146

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CCU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2C_146 not in the Motif Atlas

Geometric match to IL_5VCI_002

Geometric discrepancy: 0.1084

The information below is about IL_5VCI_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

7N2C|1|23|C|2103
7N2C|1|23|C|2104
7N2C|1|23|U|2105
*
7N2C|1|23|A|2184
7N2C|1|23|U|2185
7N2C|1|23|G|2186

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LA

50S ribosomal protein L1