IL_7N2U_107

3D structure

PDB id

7N2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

AAG*CU

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2U_107 not in the Motif Atlas

Geometric match to IL_5T83_003

Geometric discrepancy: 0.3384

The information below is about IL_5T83_003

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_34520.3

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

61

Unit IDs

7N2U|1|23|A|1089
7N2U|1|23|A|1090
7N2U|1|23|G|1091
*
7N2U|1|23|C|1100
7N2U|1|23|U|1101

Current chains

Chain 23

23S rRNA

Nearby chains

Chain Lj

50S ribosomal protein L36