IL_7N2U_110

3D structure

PDB id

7N2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

CUGCGAAG*UGGAG

Length

13 nucleotides

Bulged bases

7N2U|1|23|C|1211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2U_110 not in the Motif Atlas

Homologous match to IL_5J7L_288

Geometric discrepancy: 0.0571

The information below is about IL_5J7L_288

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.9

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

27

Unit IDs

7N2U|1|23|C|1208
7N2U|1|23|U|1209
7N2U|1|23|G|1210
7N2U|1|23|C|1211
7N2U|1|23|G|1212
7N2U|1|23|A|1213
7N2U|1|23|A|1214
7N2U|1|23|G|1215
*
7N2U|1|23|U|1234
7N2U|1|23|G|1235
7N2U|1|23|G|1236
7N2U|1|23|A|1237
7N2U|1|23|G|1238

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LT

50S ribosomal protein L20