IL_7N2V_021

3D structure

PDB id

7N2V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CAG*CAGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2V_021 not in the Motif Atlas

Homologous match to IL_5J7L_021

Geometric discrepancy: 0.126

The information below is about IL_5J7L_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_33323.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

7N2V|1|16|C|440
7N2V|1|16|A|441
7N2V|1|16|G|442
*
7N2V|1|16|C|492
7N2V|1|16|A|493
7N2V|1|16|G|494
7N2V|1|16|A|495
7N2V|1|16|A|496
7N2V|1|16|G|497

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SD

30S ribosomal protein S4