IL_7N2V_149

3D structure

PDB id

7N2V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

GUGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N2V_149 not in the Motif Atlas

Geometric match to IL_3U4M_002

Geometric discrepancy: 0.3084

The information below is about IL_3U4M_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32056.1

Basepair signature

cWW-L-cWW-L-L-tWH-R-L-R-L

Number of instances in this motif group

3

Unit IDs

7N2V|1|23|G|2110
7N2V|1|23|U|2111
7N2V|1|23|G|2112
7N2V|1|23|U|2113
7N2V|1|23|A|2114
7N2V|1|23|G|2115
7N2V|1|23|G|2116
7N2V|1|23|A|2117
7N2V|1|23|U|2118
7N2V|1|23|A|2119
7N2V|1|23|G|2120
*
7N2V|1|23|C|2178
7N2V|1|23|C|2179

Current chains

Chain 23

23S rRNA

Nearby chains

Chain Dt

Transfer RNA; tRNA