IL_7N30_042

3D structure

PDB id

7N30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

GG*CAC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N30_042 not in the Motif Atlas

Homologous match to IL_4LFB_038

Geometric discrepancy: 0.1905

The information below is about IL_4LFB_038

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_51454.3

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

45

Unit IDs

7N30|1|16|G|953
7N30|1|16|G|954
*
7N30|1|16|C|1226
7N30|1|16|A|1227
7N30|1|16|C|1228

Current chains

Chain 16

16S rRNA

Nearby chains

Chain Dt

Transfer RNA; tRNA

Chain SM

30S ribosomal protein S13

Chain SS

30S ribosomal protein S19