IL_7N30_150

3D structure

PDB id

7N30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

GUGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N30_150 not in the Motif Atlas

Homologous match to IL_3U4M_002

Geometric discrepancy: 0.3271

The information below is about IL_3U4M_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32056.1

Basepair signature

cWW-L-cWW-L-L-tWH-R-L-R-L

Number of instances in this motif group

3

Unit IDs

7N30|1|23|G|2110
7N30|1|23|U|2111
7N30|1|23|G|2112
7N30|1|23|U|2113
7N30|1|23|A|2114
7N30|1|23|G|2115
7N30|1|23|G|2116
7N30|1|23|A|2117
7N30|1|23|U|2118
7N30|1|23|A|2119
7N30|1|23|G|2120
*
7N30|1|23|C|2178
7N30|1|23|C|2179

Current chains

Chain 23

23S rRNA

Nearby chains

Chain Dt

Transfer RNA; tRNA

Chain SG

30S ribosomal protein S7