IL_7N30_154

3D structure

PDB id

7N30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

AAU*AGGUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N30_154 not in the Motif Atlas

Homologous match to IL_5J7L_332

Geometric discrepancy: 0.0683

The information below is about IL_5J7L_332

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61476.2

Basepair signature

cWW-tSH-L-cWW-L

Number of instances in this motif group

7

Unit IDs

7N30|1|23|A|2297
7N30|1|23|A|2298
7N30|1|23|U|2299
*
7N30|1|23|A|2317
7N30|1|23|G|2318
7N30|1|23|G|2319
7N30|1|23|U|2320
7N30|1|23|U|2321

Current chains

Chain 23

23S rRNA

Nearby chains

Chain 5

5S ribosomal RNA; 5S rRNA

Chain LE

50S ribosomal protein L5