IL_7N30_189

3D structure

PDB id

7N30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

GGAACUAGG*CUGUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N30_189 not in the Motif Atlas

Homologous match to IL_5J7L_386

Geometric discrepancy: 0.0484

The information below is about IL_5J7L_386

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22854.4

Basepair signature

cWW-tSH-cWW-tHW-R-L-cWW-L-L-R

Number of instances in this motif group

7

Unit IDs

7N30|1|23|G|1666
7N30|1|23|G|1667
7N30|1|23|A|1668
7N30|1|23|A|1669
7N30|1|23|C|1670
7N30|1|23|U|1671
7N30|1|23|A|1672
7N30|1|23|G|1673
7N30|1|23|G|1674
*
7N30|1|23|C|1990
7N30|1|23|U|1991
7N30|1|23|G|1992
7N30|1|23|U|1993
7N30|1|23|C|1994

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LC

50S ribosomal protein L3

Chain LN

50S ribosomal protein L14