IL_7N31_014

3D structure

PDB id

7N31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a post-translocation (POST) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

GAUUAG*CGACGAUC

Length

14 nucleotides

Bulged bases

7N31|1|16|U|244, 7N31|1|16|C|280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7N31_014 not in the Motif Atlas

Homologous match to IL_5J7L_014

Geometric discrepancy: 0.1119

The information below is about IL_5J7L_014

Detailed Annotation

Kink-turn with non-sequential stacking

Broad Annotation

Kink-turn

Motif group

IL_46174.3

Basepair signature

cWW-cSS-tSS-tSH-L-cWW-tHW-cWW

Number of instances in this motif group

5

Unit IDs

7N31|1|16|G|242
7N31|1|16|A|243
7N31|1|16|U|244
7N31|1|16|U|245
7N31|1|16|A|246
7N31|1|16|G|247
*
7N31|1|16|C|277
7N31|1|16|G|278
7N31|1|16|A|279
7N31|1|16|C|280
7N31|1|16|G|281
7N31|1|16|A|282
7N31|1|16|U|283
7N31|1|16|C|284

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SL

30S ribosomal protein S12

Chain SQ

30S ribosomal protein S17